A Biocomputational Platform for Template-based Protein-protein Docking

 

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Detalles Bibliográficos
Autores: Román-Brenes, Ricardo, Siles-Canales, Francisco, Zamora-Mata, Daniel
Formato: artículo original
Estado:Versión publicada
Fecha de Publicación:2020
Descripción:We propose the creation of a Biocomputational Platform for template-based protein-protein docking that aims reduce computational time by clustering data before the rigid body alignment. Using data from the Dockground project, models will be created using multiple clustering methods that will annotated each protein into a class, such that when performing the match search, not all of the databank needs to be inspected but just the class that resembles the most to the studied protein. This will reduce the time that conformation matching requires without incurring in lower precision.
País:Portal de Revistas TEC
Institución:Instituto Tecnológico de Costa Rica
Repositorio:Portal de Revistas TEC
Lenguaje:Inglés
OAI Identifier:oai:ojs.pkp.sfu.ca:article/5084
Acceso en línea:https://revistas.tec.ac.cr/index.php/tec_marcha/article/view/5084
Palabra clave:Clustering
protein-protein docking
template-based docking
HPC
Agrupamiento
acoplamiento de proteínas
Acoplamiento basado en plantillas